The detailed information of tRNA gene sequence


Sequence ID>A177000071
Genome IDFN869859
Search identical group
Phylum/ClassThermoproteota
SpeciesThermoproteus tenax Kra 1 [FN869859]
Start position on genome 39371
End posion on genome 39280
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
agtttgagga
tRNA gene sequence 
GGGCCCGTAGCTCAGCATGGAAGAGCGGCGGCCTTCGGAGCCGTAGGTCGTGGGTTCGAA
TCCCACCGGGCCCGtcg
Downstream region at tRNA end position 
cccttctgag
Secondary structure (Cloverleaf model)
>A177000071	Arg	TCG
                   a      Gtcg cccttctgag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     G
    A       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    T C G
intron: position=38, length=18 (in A-loop)
AGGCGTACCGCTGAAGCG
Intron
Comment/Decision
Genome/Seq. Info.-

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