The detailed information of tRNA gene sequence


Sequence ID>A178000010
Genome IDAP012489
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum camini SY1 = JCM 12091 [AP012489]
Start position on genome 1123256
End posion on genome 1123371
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ggccgggagt
tRNA gene sequence 
GGGCCCGTAGCTCAGCCCGGCAGAGCGGCGGGCTTTTACCCCGCGGAAGTCCCGGGTTCA
AATCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
caaaccccca
Secondary structure (Cloverleaf model)
>A178000010	Lys	TTT
                   t      GCCA caaaccccca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    C       | | | |                 T T
    G       G A G C
      G C A        G     GGAAGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       C
                  T       A *
                    T T T
intron: position=38, length=37 (in A-loop)
ACCCGTAGAGGGGGAGTGTTTAGGGGCTGCGTCCTGG
Intron
Comment/Decision
Genome/Seq. Info.-

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