The detailed information of tRNA gene sequence


Sequence ID>A179000187
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 71625
End posion on genome 71530
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttaggaacga
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGTTGGAGCGCCCGGCTGATAACCGGGAGGTCCCGGGTTCAA
ATCCCGGCGGGCCCAcca
Downstream region at tRNA end position 
ctgattgctt
Secondary structure (Cloverleaf model)
>A179000187	Ile	GAT
                   a      Acca ctgattgctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  A         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T G          G     AGGTC
                    C - G
                    C - G
                   *C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
intron: position=30, length=21
TGGGGCGATAGCCCCGCGTAC
Intron
Comment/Decision
Genome/Seq. Info.-

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