The detailed information of tRNA gene sequence


Sequence ID>A179000328
Genome IDCP003098
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum ferrireducens 1860 [CP003098]
Start position on genome 449775
End posion on genome 449650
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tatgcagatg
tRNA gene sequence 
GGGCCCGTGGCTTAGCCCGGTTAGAGCGCCCGGCTGATACCAGGGGGTCTGGGACAGGGT
TCAAATCCCGGCGGGCCCACCA
Downstream region at tRNA end position 
cctccgttgc
Secondary structure (Cloverleaf model)
>A179000328	Ile	GAT
                   g      ACCA cctccgttgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      |   | | |     A
  C         T T C G       C A G G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     GGTCTGGGA
                    C - G
                    C - G
                    C - G
                    G   A
                    G - C
                  C       C
                  T       A *
                    G A T
intron: position=38, length=44 (in A-loop)
AAGGGCATCCGCCCGGGCATCCGGGAGGTCCCGTCAGGCCCCCG
Intron
Comment/Decision
Genome/Seq. Info.-

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