The detailed information of tRNA gene sequence


Sequence ID>A179000380
Genome IDCP003423
Search identical group
Phylum/ClassThermoproteota
SpeciesFervidicoccus fontis Kam940 [CP003423]
Start position on genome 557323
End posion on genome 557417
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
attattaaga
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCGGGAGAGCGCCCGGCTGAAGACCGGGTTGTCGGGGGTTCAAA
TCCCCCCGGCGGCAcca
Downstream region at tRNA end position 
gagctttatt
Secondary structure (Cloverleaf model)
>A179000380	Phe	GAA
                   a      Acca gagctttatt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G G G G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        G     TTGTC
                    C - G
                    C - G
                    C - G
                   *G - C
                    G - C
                  C       A
                  T       G
                    G A A
intron: position=31, length=21
AGAGGTAGATACCTCGGCGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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