The detailed information of tRNA gene sequence


Sequence ID>A179000452
Genome IDCP006867
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnicoccus islandicus DSM 13165 [CP006867]
Start position on genome 67866
End posion on genome 67752
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atggaacggt
tRNA gene sequence 
GGGCCCGTCGTCTAGCTTGGACTAGGATGCGGGGTTCGGGTCCCCGTGGCCCCGGGTTCA
AATCCCGGCGGGCCCAcca
Downstream region at tRNA end position 
atccttaaca
Secondary structure (Cloverleaf model)
>A179000452	Pro	CGG
                   t      Acca atccttaaca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    A C T A        G     TGGCC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  T*      T
                  T       G
                    C G G
intron: position=33, length=39 (in A-loop)
ACGCCGGTACCCCCAAGGGTTTTCGGGTCGGCGCCCGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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