The detailed information of tRNA gene sequence


Sequence ID>A179000594
Genome IDCP011097
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosotenuis cloacae SAT1 [CP011097]
Start position on genome 472971
End posion on genome 472869
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgattttgt
tRNA gene sequence 
GCCGGGGTAGCTCAGCCTGGTTAGAGTGCCAGACTCATAATCTGGAGGTCGTGGGTTCAA
AACCCACCCCCGGCAtta
Downstream region at tRNA end position 
cactctataa
Secondary structure (Cloverleaf model)
>A179000594	Met	CAT
                   t      Atta cactctataa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          A A
                    T     C A C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       G T G G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                   *G - C
                    A - T
                  C       A
                  T       A
                    C A T
intron: position=31, length=28
TCTTCTATCCCTCCGATACAAGGGCATT
Intron
Comment/Decision
Genome/Seq. Info.-

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