The detailed information of tRNA gene sequence


Sequence ID>A179000673
Genome IDCP017922
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosocosmicus hydrocola G61 [CP017922]
Start position on genome 1596783
End posion on genome 1596880
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tttaaaatgt
tRNA gene sequence 
GCCGTCGTAGCTCAGCCTGGAAGAGCACTCGGCTGAAGACCGAGCTGTCGTGAGCTCAAA
TCTCACCGGCGGCActt
Downstream region at tRNA end position 
gataaatata
Secondary structure (Cloverleaf model)
>A179000673	Phe	GAA
                   t      Actt gataaatata
                     G - C
                     C - G
                     C - G
                     G - C
                     T + G
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        A      | | | | |     A
    C       C T C G       G T G A G     C
    T       | | | |                 C T
    G       G A G C
      G A A        A     CTGTC
                    C - G
                    T - A
                    C - G
                   *G - C
                    G - C
                  C       A
                  T       G
                    G A A
intron: position=31, length=24
ACTGCTAAATAATAGCAGGGTGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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