The detailed information of tRNA gene sequence


Sequence ID>A17A000039
Genome IDCP000852
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga maquilingensis IC-167 [CP000852]
Start position on genome 791066
End posion on genome 790966
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gcggaatgca
tRNA gene sequence 
GGGGCCGTAGTCTAGCCTGGTTAGGACACGTGGCTCGGGCCCGTGTGATCCCGGGTTCAA
ATCCCGGCGGCCCCACCA
Downstream region at tRNA end position 
atcacaatac
Secondary structure (Cloverleaf model)
>A17A000039	Arg	TCG
                   a      ACCA atcacaatac
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          A     TGATC
                    C - G
                    G + T
                    T + G
                    G - C
                   *G - C
                  C       C
                  T       G
                    C G G
intron: position=32, length=23
GTTTAACCACGCCTAAGGCACGG
Intron
Comment/Decision
Genome/Seq. Info.-

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