The detailed information of tRNA gene sequence


Sequence ID>A17A001825
Genome IDLN890280
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosotalea devanaterra [LN890280]
Start position on genome 1429091
End posion on genome 1429184
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgttaattaT
tRNA gene sequence 
GCCGGGGTAGCTCAGCCTGGCCTAGAGTGCCAGACTCATAATCTGGAGGTCGTGGGTTCG
AAACCCACCCCCGGTATac
Downstream region at tRNA end position 
ccttttttca
Secondary structure (Cloverleaf model)
>A17A001825	Met	CAT
                   T      ATac ccttttttca
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          A A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  T         C T C G       G T G G G     C
  G         | | | +                 T T
  G         G A G T
    C C T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                   *G - C
                    A - T
                  C       A
                  T       A
                    C A T
intron: position=31, length=16
TCCACATAAGGGTAAT
Intron
Comment/Decision
Genome/Seq. Info.-

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