The detailed information of tRNA gene sequence


Sequence ID>A179000186
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 118615
End posion on genome 118521
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actttcatta
tRNA gene sequence 
GGGCCCGTAGCTTAGCCAGGTAGAGCGCCCGGCTCATAACCGGGAGGTCCCGGGTTCGAA
TCCCGGCGGGCCCAcca
Downstream region at tRNA end position 
ttgattgttt
Secondary structure (Cloverleaf model)
>A179000186	Met	CAT
                   a      Acca ttgattgttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       T T C G       C C G G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                   *C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
intron: position=30, length=21
TGGGGCGAAGGCCCCGCGTAA
Intron
Comment/Decision
Genome/Seq. Info.-

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