The detailed information of tRNA gene sequence


Sequence ID>A179000224
Genome IDCP002529
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta moutnovskia 768-28 [CP002529]
Start position on genome 1265
End posion on genome 1360
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaccataca
tRNA gene sequence 
GCGGGGGTAGCTTAGCCCGGCTAGAGCGCCCGGCTCATAACCGGGAGGTCCCGGGTTCAA
ATCCCGGCCCCCGCAcca
Downstream region at tRNA end position 
gtttgattaa
Secondary structure (Cloverleaf model)
>A179000224	Met	CAT
                   a      Acca gtttgattaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T T C G       C C G G G     C
  G         + | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    C - G
                    C - G
                   *C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
intron: position=30, length=21
TGGGGCGAAAGCCCCGCGTAT
Intron
Comment/Decision
Genome/Seq. Info.-

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