The detailed information of tRNA gene sequence


Sequence ID>A179000370
Genome IDCP003378
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldisphaera lagunensis DSM 15908 [CP003378]
Start position on genome 495440
End posion on genome 495548
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
aatgctggat
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGTAGAGCGGCGGGCTCTTAACCCGTAGGTCCCGGGTTCAAA
TCCCGGCGGGCCCGcca
Downstream region at tRNA end position 
cacccataat
Secondary structure (Cloverleaf model)
>A179000370	Lys	CTT
                   t      Gcca cacccataat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
intron: position=46, length=35
ACAAAGGGCAGTAGCCTAGCCTGCCGTTGACGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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