The detailed information of tRNA gene sequence


Sequence ID>A179000422
Genome IDCP005934
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomassiliicoccus intestinalis Issoire-Mx1 [CP005934]
Start position on genome 730130
End posion on genome 730223
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tgcaatcaaa
tRNA gene sequence 
GGGCTTGTGGTGTAGCTTGGATATCACCGAGGCCTCCGGAGCCTCAGACCCGGGTTCGAA
TCCCGGCATGCCCGctt
Downstream region at tRNA end position 
tatatctatt
Secondary structure (Cloverleaf model)
>A179000422	Arg	CCG
                   a      Gctt tatatctatt
                     G - C
                     G - C
                     G - C
                     C - G
                     T   T
                     T - A
                     G - C          T A
                    T     G G C C C     A
    T C G A        G      | | | | |     G
  T         T G T G       C C G G G     C
  G           | | |                 T T
  G         T C A C
    A T A          C     AGAC
                    G - C
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    C C G
intron: position=38, length=20 (in A-loop)
CAGGAACTTGTCCTGGAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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