The detailed information of tRNA gene sequence


Sequence ID>A179000481
Genome IDCP007493
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1505 [CP007493]
Start position on genome 1541989
End posion on genome 1542097
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctaacctctg
tRNA gene sequence 
GGGGCCGTAGTCCAGCCTGGAAGGATGCCTGGCACCAACCCAGGTGGTCCGGGGTTCAAA
TCCCCGCGGCCCCACCA
Downstream region at tRNA end position 
acttattttc
Secondary structure (Cloverleaf model)
>A179000481	Trp	CCA
                   g      ACCA acttattttc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       C C T G       C G G G G     C
    T       | | | +                 T T
    G       G G A T
      G A A        G     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  A       A *
                    C C A
intron: position=38, length=32 (in A-loop)
TGGATGCAGGAATCGGGATCTCGAGACGAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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