The detailed information of tRNA gene sequence


Sequence ID>A179000741
Genome IDLT671858
Search identical group
Phylum/ClassUnclassified
SpeciesCuniculiplasma divulgatum S5(T) [LT671858]
Start position on genome 586285
End posion on genome 586425
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagaacctac
tRNA gene sequence 
GGGGACATGGGGTAATCAGGCATCCTATTGGGCTCCAGACCCGCAGATCTGGGTTCAAAT
CCCAGTGTCCCCActc
Downstream region at tRNA end position 
tatattgggt
Secondary structure (Cloverleaf model)
>A179000741	Trp	CCA
                   c      Actc tatattgggt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G A C C C     A
      T A A        G      | | | | |     A
    C       T G G G       C T G G G     C
    A         | | +                 T T
    G       T C C T
      G C A        A     AGAT
                    T   C
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    C C A
intron: position=38, length=68 (in A-loop)
TCAGGTTTTGATTAGAAACGGGTCAACTGATATGGTGATGATTGACTGGAACTATGAACCGGGAAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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