The detailed information of tRNA gene sequence


Sequence ID>A179000537
Genome IDCP009961
Search identical group
Phylum/ClassThermoproteota
SpeciesInfirmifilum uzonense 1807-2 [CP009961]
Start position on genome 1418306
End posion on genome 1418426
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gacgccgctg
tRNA gene sequence 
GGGCCCGTAGCGCAGTCAGGAAGCGCGGCGGCCTTCGGAGCCGTAGGTCCCGGGTTCGAG
TCCCGGCGGGCCCGcta
Downstream region at tRNA end position 
tttctcatat
Secondary structure (Cloverleaf model)
>A179000537	Arg	TCG
                   g      Gcta tttctcatat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G G C C C     A
      T G A        A      | | | | |     G
    C       C G C G       C C G G G     C
    A       | | | |                 T T
    G       G C G C
      G A A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C*      A
                  T       G
                    T C G
intron: position=33, length=20 (in A-loop)
ACGCTCCACGAGCGCCGCAC
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK