The detailed information of tRNA gene sequence


Sequence ID>A179000359
Genome IDCP003321
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus DSM 16532 [CP003321]
Start position on genome 1136331
End posion on genome 1136188
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gacttgtagt
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGCAGAGCGGCGGGCTCCAGACCCGTAGGTCAGGGGTTCGAA
TCCCCTCGGGCCCActa
Downstream region at tRNA end position 
ctttttatcc
Secondary structure (Cloverleaf model)
>A179000359	Trp	CCA
                   t      Acta ctttttatcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     G
    C       C T C G       A G G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    G + T
                    C - G
                    G - C
                   *G - C
                    G - C
                  C       A
                  T       G
                    C C A
intron: position=31, length=18
ACGCCTCTGGCGGCCGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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