The detailed information of tRNA gene sequence


Sequence ID>A17A000464
Genome IDCP002098
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnisphaera aggregans DSM 17230 [CP002098]
Start position on genome 1778053
End posion on genome 1777943
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tattggctgt
tRNA gene sequence 
GGGCCCGTCGTCTAGCTTGGTAGGATGCGGGGTTCGGGACCCCGTGGTCCCGGGTTCAAG
TCCCGGCGGGCCCACta
Downstream region at tRNA end position 
cccatatgac
Secondary structure (Cloverleaf model)
>A17A000464	Leu	CAG
                   t      ACta cccatatgac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G G C C C     A
      C G A        C      | | | | |     A
    T       T C T G       C C G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        G     TGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  T*      A
                  T       G
                    C G G
intron: position=33, length=21 (in A-loop)
ACACCTAATAAGGTGCCCGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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