The detailed information of tRNA gene sequence


Sequence ID>A173000091
Genome IDCP003098
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum ferrireducens 1860 [CP003098]
Start position on genome 1244369
End posion on genome 1244278
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aagggggaac
tRNA gene sequence 
GGGCCCGTAGTCTAGCGGTAGGATGCCCGCCTGACGCGCGGGTGATCCCGGGTTCAAATC
CCGGCGGGCCCAcct
Downstream region at tRNA end position 
atttttaccc
Secondary structure (Cloverleaf model)
>A173000091	Val	GAC
                   c      Acct atttttaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      C     T C T G       C C G G G     C
      G     + | | +                 T T
      G     G G A T
        T A        G     TGATC
                    C - G
                    C - G
                   *C - G
                    G - C
                    C - G
                  C       C
                  T       G
                    G A C
intron: position=30, length=20
AGGGGCGGAGCCCCGCATTT
Intron
Comment/Decision
Genome/Seq. Info.-

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