The detailed information of tRNA gene sequence


Sequence ID>A173000190
Genome IDCP007493
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1505 [CP007493]
Start position on genome 1389901
End posion on genome 1389813
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
actattcgta
tRNA gene sequence 
GCCCCGGTCGTCTAGTGGCCCAGGATGGCGGCCTGTCGAGCCGCAGAACCCGGGTTCGAA
TCCCGGCCGGGGCGcca
Downstream region at tRNA end position 
cgcccctctt
Secondary structure (Cloverleaf model)
>A173000190	Asp	GTC
                   a      Gcca cgcccctctt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       C C G G G     C
    G       + | | +                 T T
    C       G G A T
      C C A        G     AGAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
intron: position=25, length=15
AGGCTAACCCTGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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