The detailed information of tRNA gene sequence


Sequence ID>A173000276
Genome IDCP012158
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum sp. WP30 [CP012158]
Start position on genome 1598447
End posion on genome 1598535
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
aacaggtacg
tRNA gene sequence 
AGCCCGGTCGTCTAGCGGCCAAGGATGCGGGGCTCTGGACCCCGTGGCCCGGGTTCGAAT
CCCGGCCGGGCTAtcg
Downstream region at tRNA end position 
acagactctt
Secondary structure (Cloverleaf model)
>A173000276	Gln	CTG
                   g      Atcg acagactctt
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       C C G G G     C
    G       + | | +                 T T
    C       G G A T
      C A A        G     TGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C T G
intron: position=22, length=16 (in D-loop)
AGGAAAACCCGGCTTG
Intron
Comment/Decision
Genome/Seq. Info.-

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