The detailed information of tRNA gene sequence


Sequence ID>W131000409
Genome IDAGEJ01000022
Search identical group
Phylum/ClassBacillota
SpeciesEggerthia catenaformis OT 569 = DSM 20559 [AGEJ]
Start position on genome 21559
End posion on genome 21483
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
taaatagtat
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGATGGTTCAAA
TCCATTCAGGCCCACCA
Downstream region at tRNA end position 
ttctatttat
Secondary structure (Cloverleaf model)
>W131000409	Ile	GAT
                   t      ACCA ttctatttat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T A C C     A
      T G A        A      + | | | |     A
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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