The detailed information of tRNA gene sequence


Sequence ID>W131108243
Genome IDAPGA01000051
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 str. NHCC-004A [APGA]
Start position on genome 104
End posion on genome 180
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaaaactac
tRNA gene sequence 
AGGGGTGTAGCTCCAATTGGCAGAGCAGCGGATTCCAAATCCGCGTGTTGGGAGTTCGAA
TCTCTCCACCCCTGCCA
Downstream region at tRNA end position 
tatatcgaac
Secondary structure (Cloverleaf model)
>W131108243	Trp	CCA
                   c      GCCA tatatcgaac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G A G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GTGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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