The detailed information of tRNA gene sequence


Sequence ID>W131231305
Genome IDAUIJ01000006
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSediminimonas qiaohouensis DSM 21189 [AUIJ]
Start position on genome 70593
End posion on genome 70517
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgtgcagcgg
tRNA gene sequence 
GCGGTTGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCAACCGCGCCA
Downstream region at tRNA end position 
tcgctgcaca
Secondary structure (Cloverleaf model)
>W131231305	Asp	GTC
                   g      GCCA tcgctgcaca
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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