The detailed information of tRNA gene sequence


Sequence ID>C171000129
Genome IDAP017913
Search identical group
Phylum/ClassBacteroidota
SpeciesCandidatus Azobacteroides pseudotrichonymphae [AP017913, AP017914]
Start position on genome 198562
End posion on genome 198647
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agtgttttaa
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGAACTGAATGGTTCC
TGGGGTTCGAATCCCTATCTCTCCGCat
Downstream region at tRNA end position 
atataatgtt
Secondary structure (Cloverleaf model)
>C171000129	Ser	TGA
                   a      GCat atataatgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       T G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAACTGAATGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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