The detailed information of tRNA gene sequence


Sequence ID>C171000135
Genome IDAP017913
Search identical group
Phylum/ClassBacteroidota
SpeciesCandidatus Azobacteroides pseudotrichonymphae [AP017913, AP017914]
Start position on genome 404954
End posion on genome 405029
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atgccattat
tRNA gene sequence 
CGAGGTATAGCGTAGTCCGGTTAGCGCACCTGCTTTGGGAGCAGGGGGCCGCAGGTTCGA
ATCCTGCTACCTCGACag
Downstream region at tRNA end position 
atttaaaata
Secondary structure (Cloverleaf model)
>C171000135	Pro	TGG
                   t      ACag atttaaaata
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     G
  C         T G C G       G C A G G     C
  G         + | | |                 T T
  G         G C G C
    T T A          A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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