The detailed information of tRNA gene sequence


Sequence ID>C171000139
Genome IDAP017913
Search identical group
Phylum/ClassBacteroidota
SpeciesCandidatus Azobacteroides pseudotrichonymphae [AP017913, AP017914]
Start position on genome 650361
End posion on genome 650451
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaacacaaa
tRNA gene sequence 
GGAGAGATGCTCGAGTGGACAAAGAGGCACATTTGGAAAGTGTGTATATCTTTAAACATG
ATATCACGGGTTCGAATCCCGTTCTCTCCGCtt
Downstream region at tRNA end position 
ttttatagaa
Secondary structure (Cloverleaf model)
>C171000139	Ser	GGA
                   a      GCtt ttttatagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       A C G G G     C
    G         | | |                 T T
    A       A G A G
      C A A        G     TATATCTTTAAACATGATATC
                    C - G
                    A - T
                    C - G
                    A - T
                    T + G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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