The detailed information of tRNA gene sequence


Sequence ID>C171000141
Genome IDAP017913
Search identical group
Phylum/ClassBacteroidota
SpeciesCandidatus Azobacteroides pseudotrichonymphae [AP017913, AP017914]
Start position on genome 693716
End posion on genome 693641
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaatgtagat
tRNA gene sequence 
GGTGTGGTAGTTCAGCTTGGTTAGAATACATGCCTGTCACGCATGGGGTCGCGGGTTCGA
GTCCCGTCCATACCGCat
Downstream region at tRNA end position 
gtagattgtt
Secondary structure (Cloverleaf model)
>C171000141	Asp	GTC
                   t      GCat gtagattgtt
                     G - C
                     G - C
                     T - A
                     G + T
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
    T C G A        A      + | | | |     G
  T         C T T G       G C G G G     C
  G         | | | +                 T T
  G         G A A T
    T T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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