The detailed information of tRNA gene sequence


Sequence ID>C171000149
Genome IDAP017913
Search identical group
Phylum/ClassBacteroidota
SpeciesCandidatus Azobacteroides pseudotrichonymphae [AP017913, AP017914]
Start position on genome 242074
End posion on genome 241987
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tataaattac
tRNA gene sequence 
GGAAGTGTGGGTGAGAGGATGAAACCAACAGTTTGCTAAACTGTCGTACAAGTAATTGTA
CCACGAGTTCGAATCTCGTCGCTTCCGCtt
Downstream region at tRNA end position 
ctgtaaaaac
Secondary structure (Cloverleaf model)
>C171000149	Ser	GCT
                   c      GCtt ctgtaaaaac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     T G C T C     A
      A G A        G      | | | | |     G
    G       G T G G       A C G A G     C
    G         | | |                 T T
    A       A A C C
      T G A        A     CGTACAAGTAATTGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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