The detailed information of tRNA gene sequence


Sequence ID>C171000728
Genome IDCP007223
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho sp. 1063 [CP007223]
Start position on genome 162419
End posion on genome 162493
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttcaatgcat
tRNA gene sequence 
GGGTGCGTAGCTCAGTGGGAGAGCGCTTCCTTCACACGGAAGAGGCCGCAGGTTCAATCC
CTGCCGCACCCACCA
Downstream region at tRNA end position 
aaaggggcct
Secondary structure (Cloverleaf model)
>C171000728	Val	CAC
                   t      ACCA aaaggggcct
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C          C T
                    T     C G T C C     A
        G A        A      | | | | |     A
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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