The detailed information of tRNA gene sequence


Sequence ID>C171000775
Genome IDCP007223
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho sp. 1063 [CP007223]
Start position on genome 248249
End posion on genome 248172
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taccagagtt
tRNA gene sequence 
GGGGACGTGGTGAAGCCTGGTTATCACGCCGGTCTGTCACACCGGTGGCCGCGGGTTCAA
ATCCCGTCGTCCCCGCCA
Downstream region at tRNA end position 
attaaaaaga
Secondary structure (Cloverleaf model)
>C171000775	Asp	GTC
                   t      GCCA attaaaaaga
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
    C C G A        G      + | | | |     A
  T         A G T G       G C G G G     C
  G         | | | |                 T T
  G         T C A C
    T T A          G     TGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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