The detailed information of tRNA gene sequence


Sequence ID>C171001559
Genome IDCP008743
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Nucleicultrix amoebiphila FS5 [CP008743]
Start position on genome 309753
End posion on genome 309842
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gctaaaccaa
tRNA gene sequence 
GGAGGGGTGCCGGAGCGGTCGAACGGGGCGGTCTCGAAAACCGTTGTGCGTGTAAGCGTA
CCGAGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
gattttttga
Secondary structure (Cloverleaf model)
>C171001559	Ser	CGA
                   a      GCCA gattttttga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGCGTGTAAGCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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