The detailed information of tRNA gene sequence


Sequence ID>C171001590
Genome IDCP008743
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Nucleicultrix amoebiphila FS5 [CP008743]
Start position on genome 609286
End posion on genome 609196
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agtccctaga
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTGAAGGCGCACGATTGGAAATCGTGTATACGTTAATAGCGT
ATCGTGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
tccgttcgtc
Secondary structure (Cloverleaf model)
>C171001590	Ser	GGA
                   a      GCCA tccgttcgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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