The detailed information of tRNA gene sequence


Sequence ID>C171001790
Genome IDCP009111
Search identical group
Phylum/ClassActinomycetota
SpeciesRhodococcus opacus 1CP [CP009111]
Start position on genome 5468661
End posion on genome 5468589
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aatcatcgat
tRNA gene sequence 
GCGGGTGTGACTGAGTGGTTGAGGTACCGGCCTGCAAAGCCGTTCACACGGGTTCGAATC
CCGTCACTCGCTCgg
Downstream region at tRNA end position 
gtgagaaccg
Secondary structure (Cloverleaf model)
>C171001790	Cys	GCA
                   t      TCgg gtgagaaccg
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        G      | | | | |     G
    G       G T C A       A C G G G     C
    G         + | |                 T T
    T       A G G T
      T G          A     TCAC
                    C   T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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