The detailed information of tRNA gene sequence


Sequence ID>C171002405
Genome IDCP009471
Search identical group
Phylum/ClassThermotogota
SpeciesMarinitoga sp. 1137 [CP009471]
Start position on genome 1905923
End posion on genome 1905998
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttaggtac
tRNA gene sequence 
ACGCCTGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAATCGCAGGCTGGGGGTTCAAGT
CCCTCCGGGCGTGCCA
Downstream region at tRNA end position 
aaaaaagtgg
Secondary structure (Cloverleaf model)
>C171002405	Trp	CCA
                   c      GCCA aaaaaagtgg
                     A - T
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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