The detailed information of tRNA gene sequence


Sequence ID>C171002408
Genome IDCP009471
Search identical group
Phylum/ClassThermotogota
SpeciesMarinitoga sp. 1137 [CP009471]
Start position on genome 2091513
End posion on genome 2091424
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attgtgcgtc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCCGAAGGCGCTTGCCTGCTAAGCAAGTGTGGGGGTAACTCCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttttttttac
Secondary structure (Cloverleaf model)
>C171002408	Ser	GCT
                   c      GCCA ttttttttac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TGTGGGGGTAACTCCACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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