The detailed information of tRNA gene sequence


Sequence ID>C171002424
Genome IDCP009471
Search identical group
Phylum/ClassThermotogota
SpeciesMarinitoga sp. 1137 [CP009471]
Start position on genome 851906
End posion on genome 851816
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taaatgtaac
tRNA gene sequence 
GGAGGCGTGTTCCGAATTGGCTAAGGAGCCGGTCTCGAAAACCGGTGAGGATAATATCCT
CGTGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
tttttttata
Secondary structure (Cloverleaf model)
>C171002424	Ser	CGA
                   c      GCCA tttttttata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
    T A A G        G      | | | | |     G
  T         C C T T       G T G G G     C
  G           | + |                 T T
  G         A G G A
    C T A          G     TGAGGATAATATCCTCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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