The detailed information of tRNA gene sequence


Sequence ID>C171002432
Genome IDCP009471
Search identical group
Phylum/ClassThermotogota
SpeciesMarinitoga sp. 1137 [CP009471]
Start position on genome 116822
End posion on genome 116746
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcacggttaa
tRNA gene sequence 
GGCAACGTAGCCAAGGGGTCTAAGGCGGCGGTCTGCAAAATCGCTATTCGTGGGTTCAAA
TCCCACCGTTGCCTCCA
Downstream region at tRNA end position 
ttctataccc
Secondary structure (Cloverleaf model)
>C171002432	Cys	GCA
                   a      TCCA ttctataccc
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      G G A        A      | | | | |     A
    G       A C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TATTC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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