The detailed information of tRNA gene sequence


Sequence ID>C171008212
Genome IDCP011175
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis E976 [CP011175]
Start position on genome 543436
End posion on genome 543361
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gcggtgcaag
tRNA gene sequence 
GGGTGCTTAGCTCAGCTGGTAGAGCGGCGCCCTTACAAGGCGTAGGTCACAGGTTCGACC
CCTGTAGCACCCACCA
Downstream region at tRNA end position 
agaatcaagg
Secondary structure (Cloverleaf model)
>C171008212	Val	TAC
                   g      ACCA agaatcaagg
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          C C
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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