The detailed information of tRNA gene sequence


Sequence ID>C171008421
Genome IDCP011181
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis F687 [CP011181]
Start position on genome 547666
End posion on genome 547750
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aggcagcaaa
tRNA gene sequence 
GCCCAGGTGGCGGAATTGGTAGACGCGCATGGTTCAGGTCCATGTGCCGCAAGGTGTGGA
GGTTCGAGTCCTCTCCTGGGCACCA
Downstream region at tRNA end position 
atacatactt
Secondary structure (Cloverleaf model)
>C171008421	Leu	CAG
                   a      ACCA atacatactt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGCCGCAAGGTGT
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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