The detailed information of tRNA gene sequence


Sequence ID>C171010480
Genome IDCP011319
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesJanthinobacterium sp. 1_2014MBL_MicDiv [CP011319]
Start position on genome 2383934
End posion on genome 2384008
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcctcgcttc
tRNA gene sequence 
GGGAGGTTAGCTCAGGGGTAGAGCACTGCATTCACACTGCAGGGGTCGCAAGTTCGAAAC
TTGCACTTCCCACCA
Downstream region at tRNA end position 
gatttttcgt
Secondary structure (Cloverleaf model)
>C171010480	Val	CAC
                   c      ACCA gatttttcgt
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     T - A          A A
                    T     C G T T C     A
        G A        A      | | | | |     G
      G     C T C G       G C A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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