The detailed information of tRNA gene sequence


Sequence ID>C171011869
Genome IDCP011705
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis H842 [CP011705]
Start position on genome 3538563
End posion on genome 3538637
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tcgcctcttc
tRNA gene sequence 
GCGCCCGTAGTTCAATGGATAGAATGAGAGTTTCCGAAGCTCTTGATACAGGTTCGATTC
CTGTCGGGCGCGCCA
Downstream region at tRNA end position 
gtttcccaag
Secondary structure (Cloverleaf model)
>C171011869	Arg	CCG
                   c      GCCA gtttcccaag
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       C T T G       A C A G G     C
    G       | | | +                 T T
    A       G A A T
      T A          G     TGAT
                    A - T
                    G - C
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.-

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