The detailed information of tRNA gene sequence


Sequence ID>C171012129
Genome IDCP011710
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis H866 [CP011710]
Start position on genome 2414801
End posion on genome 2414725
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaggtttcgc
tRNA gene sequence 
GGGTCTGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAA
TCCAACCAGACCCACCA
Downstream region at tRNA end position 
aggtttcctg
Secondary structure (Cloverleaf model)
>C171012129	Ile	GAT
                   c      ACCA aggtttcctg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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