The detailed information of tRNA gene sequence


Sequence ID>C171015894
Genome IDCP012087
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis J038 [CP012087]
Start position on genome 3391322
End posion on genome 3391232
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atccagatca
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGCGTGTATACGTGATAAGCGT
ATCGGGGGTTCGAATCCCCCTCTGTCCGCCA
Downstream region at tRNA end position 
gaaatttgtt
Secondary structure (Cloverleaf model)
>C171015894	Ser	GGA
                   a      GCCA gaaatttgtt
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGTGATAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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