The detailed information of tRNA gene sequence


Sequence ID>C171020498
Genome IDCP013089
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis J179 [CP013089]
Start position on genome 2568608
End posion on genome 2568697
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agcacacccc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGCCGGACTCGAAATCCGGTATACGTTTAGGCGTA
TCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gacattgcaa
Secondary structure (Cloverleaf model)
>C171020498	Ser	CGA
                   c      GCCA gacattgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TATACGTTTAGGCGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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