The detailed information of tRNA gene sequence


Sequence ID>C171022229
Genome IDCP013290
Search identical group
Phylum/ClassActinomycetota
SpeciesJanibacter indicus YFY001 [CP013290]
Start position on genome 2872613
End posion on genome 2872521
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgggttgtct
tRNA gene sequence 
GGAGGCGTCGCCTAGTCCGGTCTATGGCGCCGCACTGCTAATGCGGTTTGGGCTAACCGC
CCATCGAGGGTTCAAATCCCTCCGCCTCCGCCA
Downstream region at tRNA end position 
gcggacgaga
Secondary structure (Cloverleaf model)
>C171022229	Ser	GCT
                   t      GCCA gcggacgaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  C         T C C G       G A G G G     C
  G           | | |                 T T
  G         T G G C
    T C T A        G     TTTGGGCTAACCGCCCATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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