The detailed information of tRNA gene sequence


Sequence ID>C171022287
Genome IDCP013301
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae C5 [CP013301, CP013302]
Start position on genome 591843
End posion on genome 591919
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
taagcattgc
tRNA gene sequence 
GCGCTCGTAGCTCAGCTGGATAGAGTACCTGGCTACGAACCAGGCGGTCAGAGGTTCGAA
TCCTCTCGAGCGCGCCA
Downstream region at tRNA end position 
tattagaagc
Secondary structure (Cloverleaf model)
>C171022287	Arg	ACG
                   c      GCCA tattagaagc
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     CGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.-

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