The detailed information of tRNA gene sequence


Sequence ID>C171022332
Genome IDCP013301
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae C5 [CP013301, CP013302]
Start position on genome 983191
End posion on genome 983107
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aaaataccct
tRNA gene sequence 
GGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCTCCGCCTTCGAT
GGTTCGAATCCGTCCCCCTCCACCA
Downstream region at tRNA end position 
tatacagaaa
Secondary structure (Cloverleaf model)
>C171022332	Tyr	GTA
                   t      ACCA tatacagaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      T G A        T      | | + | |     G
    G       G C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCTCCGCCTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.-

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