The detailed information of tRNA gene sequence


Sequence ID>C171024325
Genome IDCP013422
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia ubonensis MSMB0783 [CP013420, CP013421, CP013422]
Start position on genome 683492
End posion on genome 683587
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tttctcccaa
tRNA gene sequence 
GGAAGGCATTCGTATCCGGTGGTACGGCCGGACTTCAAATCCGGTTAGGGGCGTCAGACG
CTCCTGGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
gtcaacgctt
Secondary structure (Cloverleaf model)
>C171024325	SeC(p)	TCA
                   a      GCCA gtcaacgctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C T        T      | + | | |     G
    G       A T G C       G T A G G     C
    G       | | | |                 T T
    T       T A C G
      G G          G     TTAGGGGCGTCAGACGCTCCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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